Virtual Chemist

and

Chemical Engineer

Software that can predict organic reaction products is a hotly pursued but unsolved challenge because of its obvious potential. However, regiochemistry and stereochemistry are not included in the vast majority of the previous efforts, although their control is often the most challenging and interesting part of organic reactions. This is not an accidental omission but maybe an inherent problem with data structures of computer molecular representation.

VirtualChemist is an atom-based organic reaction software suite focusing on regiochemistry and stereochemistry. Using Lewis formula as the only user input, which can be either an existing molecule or a molecule unknown yet,
(1). Model Kit can generate the molecule 3D structure and let users to look at the 3D structure from different perspectives.
(2). Stereoisomer can identify all the stereocenters and stereoisomers for the compounds with tetrahedral carbon stereocenters.  For simple molecules, it can detect meso-compound. It can also handle molecules with carbon-carbon and carbon-nitrogen double bond stereocenters.
(3). Tautomer can simulate the practice of chemists writing acid/base catalyzed tautomerization and enumerate all the tautomers. It can track the stereochemistry change caused by tautomerism
(4). OrgReaction is a general organic reaction mechanism software. For the reaction types implemented so far, it can describe detailed reaction mechanism and track molecular 3D configuration changes in every elementary steps.

The trial versions and some sample cases can be downloaded free. The demo videos show the basic graphic user interfaces of the software and its basic functionalities.

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ProcessEngineer - CompressorDynamics is a petro-chemical process simulation software, focusing on compressor dynamics. It may be useful for centrifugal compressor surge analysis as well as the start-up and shutdown simulations of centrifugal compressors.  

Model Kit

A molecular 3D structure presenter.

Stereoisomer

A stereoisomer generator.

Tautomer

A tautomer generator.

A Paper on Tautomer Software

A Tautomerization Software Based on Lewis Structures and Reaction Mechanisms

OrgReaction (in progress)

A general organic reaction software.

Reaction Stereochemistry

(Notes on Software Application Examples.)

Compressor Dynamics

An application based on ProcessEngineer.

Sample Cases

使用说明(制冷循环中离心式压缩机停车和开车的模拟-1)

使用说明(制冷循环中离心式压缩机停车和开车的模拟-2)

使用说明-II(离心式压缩机停车和开车的模拟)

Oil Characterization

  • Calgary, Alberta, Canada
  • 微信:目前无法联通.

The developer, Ming Yu, is a retired engineer. He attended schools in China and has degrees of BS, MS, and PhD all in chemical engineering. His earlier careers included thermodynamic calculations and engineering software development, his industrial experiences included plant design, operation, and technical services in petrochemical industries.